STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO93385.1Glutamate--putrescine ligase; Belongs to the glutamine synthetase family. (452 aa)    
Predicted Functional Partners:
SEN68043.1
Glutamate synthase (NADH) large subunit.
  
 
 0.954
SEN89831.1
Glutamate mutase subunit E.
   
 0.896
SEN58798.1
Glutamate dehydrogenase.
     
 0.842
SEO93373.1
Amino acid/polyamine/organocation transporter, APC superfamily.
 
     0.837
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.829
SEN97652.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
     
 0.825
SEO32603.1
Glutamine synthetase.
  
  
 
0.813
SEO26093.1
L-glutamine synthetase.
  
  
 
0.811
SEO26760.1
L-glutamine synthetase.
  
  
0.808
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
 
 
 0.803
Your Current Organism:
Streptomyces rubidus
NCBI taxonomy Id: 310780
Other names: CGMCC 4.2026, JCM 13277, NBRC 102073, S. rubidus, Streptomyces rubidus Xu et al. 2006, Streptomyces sp. 13c15, strain 13c15
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