STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN23373.1Predicted amidohydrolase. (313 aa)    
Predicted Functional Partners:
SDN23312.1
Glycosyltransferase, MSMEG_0565 family.
 
    0.953
SDN23403.1
Putative N-acetyltransferase, MSMEG_0567 N-terminal domain family.
 
   
 0.949
SDN23433.1
Radical SAM protein, MSMEG_0568 family.
 
     0.949
SDN23456.1
MSMEG_0572 family protein.
 
   
 0.949
SDN23491.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
 
    0.884
SDN73486.1
Glutamate synthase (NADH) large subunit.
    
 0.867
SDO49411.1
Dihydropyrimidinase.
 
 
 0.835
SDN23338.1
Predicted amidohydrolase.
 
    
0.811
SDO49438.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
  0.802
SDN65204.1
2,2-dialkylglycine decarboxylase (pyruvate); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
  0.780
Your Current Organism:
Streptomyces guanduensis
NCBI taxonomy Id: 310781
Other names: CGMCC 4.2022, JCM 13274, NBRC 102070, S. guanduensis, Streptomyces guanduensis Xu et al. 2006, Streptomyces sp. 701, strain 701
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.