STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN24614.1N-acetylmuramoyl-L-alanine amidase. (673 aa)    
Predicted Functional Partners:
SDP14387.1
Peptidase_C39 like family protein.
 
     0.722
SDO06835.1
Hypothetical protein.
  
     0.561
SDM73401.1
Ribosomal protection tetracycline resistance protein.
  
    0.504
SDO54247.1
Acetyltransferase (GNAT) family protein.
  
     0.483
SDN24543.1
Thioredoxin; Belongs to the thioredoxin family.
       0.442
SDN24581.1
DNA-binding transcriptional regulator, MerR family.
       0.442
SDN00231.1
Protein of unknown function.
  
     0.433
lysS
lysyl-tRNA synthetase, class I; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.405
Your Current Organism:
Streptomyces guanduensis
NCBI taxonomy Id: 310781
Other names: CGMCC 4.2022, JCM 13274, NBRC 102070, S. guanduensis, Streptomyces guanduensis Xu et al. 2006, Streptomyces sp. 701, strain 701
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.