Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDN03847.1 | SDN28247.1 | SAMN05216259_102408 | SAMN05216259_103404 | Aspartate kinase; Belongs to the aspartokinase family. | Succinyldiaminopimelate desuccinylase. | 0.540 |
| SDN03847.1 | SDN28318.1 | SAMN05216259_102408 | SAMN05216259_103406 | Aspartate kinase; Belongs to the aspartokinase family. | Succinyldiaminopimelate aminotransferase apoenzyme. | 0.727 |
| SDN03847.1 | SDN28344.1 | SAMN05216259_102408 | SAMN05216259_103407 | Aspartate kinase; Belongs to the aspartokinase family. | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.415 |
| SDN03847.1 | SDN73486.1 | SAMN05216259_102408 | SAMN05216259_105349 | Aspartate kinase; Belongs to the aspartokinase family. | Glutamate synthase (NADH) large subunit. | 0.699 |
| SDN03847.1 | SDP30720.1 | SAMN05216259_102408 | SAMN05216259_12318 | Aspartate kinase; Belongs to the aspartokinase family. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.670 |
| SDN03847.1 | dapB | SAMN05216259_102408 | SAMN05216259_116124 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.897 |
| SDN03847.1 | dapD | SAMN05216259_102408 | SAMN05216259_105443 | Aspartate kinase; Belongs to the aspartokinase family. | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA. | 0.758 |
| SDN03847.1 | dapF | SAMN05216259_102408 | SAMN05216259_11233 | Aspartate kinase; Belongs to the aspartokinase family. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.872 |
| SDN28247.1 | SDN03847.1 | SAMN05216259_103404 | SAMN05216259_102408 | Succinyldiaminopimelate desuccinylase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.540 |
| SDN28247.1 | SDN28318.1 | SAMN05216259_103404 | SAMN05216259_103406 | Succinyldiaminopimelate desuccinylase. | Succinyldiaminopimelate aminotransferase apoenzyme. | 0.971 |
| SDN28247.1 | SDN28344.1 | SAMN05216259_103404 | SAMN05216259_103407 | Succinyldiaminopimelate desuccinylase. | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.672 |
| SDN28247.1 | dapB | SAMN05216259_103404 | SAMN05216259_116124 | Succinyldiaminopimelate desuccinylase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.737 |
| SDN28247.1 | dapD | SAMN05216259_103404 | SAMN05216259_105443 | Succinyldiaminopimelate desuccinylase. | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA. | 0.818 |
| SDN28247.1 | dapF | SAMN05216259_103404 | SAMN05216259_11233 | Succinyldiaminopimelate desuccinylase. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.990 |
| SDN28318.1 | SDN03847.1 | SAMN05216259_103406 | SAMN05216259_102408 | Succinyldiaminopimelate aminotransferase apoenzyme. | Aspartate kinase; Belongs to the aspartokinase family. | 0.727 |
| SDN28318.1 | SDN28247.1 | SAMN05216259_103406 | SAMN05216259_103404 | Succinyldiaminopimelate aminotransferase apoenzyme. | Succinyldiaminopimelate desuccinylase. | 0.971 |
| SDN28318.1 | SDN28344.1 | SAMN05216259_103406 | SAMN05216259_103407 | Succinyldiaminopimelate aminotransferase apoenzyme. | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.943 |
| SDN28318.1 | SDN28374.1 | SAMN05216259_103406 | SAMN05216259_103408 | Succinyldiaminopimelate aminotransferase apoenzyme. | Acetyltransferase (GNAT) family protein. | 0.728 |
| SDN28318.1 | SDN28412.1 | SAMN05216259_103406 | SAMN05216259_103409 | Succinyldiaminopimelate aminotransferase apoenzyme. | Regulator of sirC expression, contains transglutaminase-like and TPR domains. | 0.728 |
| SDN28318.1 | SDN73486.1 | SAMN05216259_103406 | SAMN05216259_105349 | Succinyldiaminopimelate aminotransferase apoenzyme. | Glutamate synthase (NADH) large subunit. | 0.913 |
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