STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN30787.1DNA-binding transcriptional regulator, PadR family. (174 aa)    
Predicted Functional Partners:
SDN30854.1
FtsX-like permease family protein.
 
   
 0.981
SDN30825.1
Putative ABC transport system ATP-binding protein.
 
     0.942
SDO53897.1
Sirohydrochlorin ferrochelatase.
   
    0.873
SDN30698.1
SPFH domain / Band 7 family protein.
       0.792
SDN30754.1
Hypothetical protein.
       0.792
SDO08847.1
4-alpha-glucanotransferase.
       0.422
SDP00670.1
Regulatory protein, luxR family.
  
    0.403
Your Current Organism:
Streptomyces guanduensis
NCBI taxonomy Id: 310781
Other names: CGMCC 4.2022, JCM 13274, NBRC 102070, S. guanduensis, Streptomyces guanduensis Xu et al. 2006, Streptomyces sp. 701, strain 701
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.