STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN42026.1Protein of unknown function. (394 aa)    
Predicted Functional Partners:
SDO09938.1
Hypothetical protein.
  
     0.659
SDO41856.1
Hypothetical protein.
  
     0.624
SDN43608.1
AAA domain-containing protein.
  
     0.609
SDN02912.1
Ca2+-binding protein, EF-hand superfamily.
  
     0.602
SDO20051.1
Putative transmembrane protein (PGPGW).
  
     0.569
SDO84778.1
Hypothetical protein.
  
     0.546
SDO64463.1
Hypothetical protein.
  
     0.543
SDN44065.1
Hypothetical protein.
  
     0.528
SDN02939.1
Isocitrate/isopropylmalate dehydrogenase.
  
     0.521
SDN65882.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.519
Your Current Organism:
Streptomyces guanduensis
NCBI taxonomy Id: 310781
Other names: CGMCC 4.2022, JCM 13274, NBRC 102070, S. guanduensis, Streptomyces guanduensis Xu et al. 2006, Streptomyces sp. 701, strain 701
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