STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN64282.1Transcriptional regulator, TetR family. (189 aa)    
Predicted Functional Partners:
SDN64315.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
     0.597
SDN48989.1
Protein of unknown function.
  
     0.532
SDP35905.1
Protein of unknown function.
  
     0.531
SDM69345.1
FBP C-terminal treble-clef zinc-finger.
  
     0.492
SDP00956.1
Carbohydrate binding module (family 35).
  
     0.479
SDN50096.1
DNA-binding transcriptional regulator, ArsR family.
  
     0.462
SDP10286.1
Transcriptional regulator, TetR family.
  
     0.441
SDM73760.1
Methyltransferase domain-containing protein.
  
 
   0.435
SDN19196.1
Transcriptional regulator, ArsR family.
  
     0.430
SDM81455.1
Hypothetical protein.
  
     0.428
Your Current Organism:
Streptomyces guanduensis
NCBI taxonomy Id: 310781
Other names: CGMCC 4.2022, JCM 13274, NBRC 102070, S. guanduensis, Streptomyces guanduensis Xu et al. 2006, Streptomyces sp. 701, strain 701
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.