STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN95395.1Undecaprenyl-diphosphatase. (200 aa)    
Predicted Functional Partners:
SDN95362.1
Membrane-associated protein.
     
 0.894
rplF
LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.785
SDP33324.1
Phosphopantetheine attachment site.
 
 
 0.727
SDN48022.1
Phosphopantetheine attachment site.
   
 0.708
mraY
Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
    
  0.596
SDP37656.1
A/G-specific DNA-adenine glycosylase.
  
    0.575
SDP37629.1
Hypothetical protein.
       0.571
SDN77940.1
Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily.
    
  0.565
SDM64332.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 0.562
SDN95291.1
Zn-dependent protease with chaperone function.
       0.552
Your Current Organism:
Streptomyces guanduensis
NCBI taxonomy Id: 310781
Other names: CGMCC 4.2022, JCM 13274, NBRC 102070, S. guanduensis, Streptomyces guanduensis Xu et al. 2006, Streptomyces sp. 701, strain 701
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