STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tamTrans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate. (272 aa)    
Predicted Functional Partners:
SDN87762.1
Transcriptional regulator, MarR family.
     
 0.879
SDN48022.1
Phosphopantetheine attachment site.
    
  0.868
SDN96255.1
Pristinamycin I synthase-3 and 4.
    
  0.694
SDN96291.1
Amino acid adenylation domain-containing protein.
    
  0.694
SDP33324.1
Phosphopantetheine attachment site.
 
  
 0.645
SDP38615.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
    
  0.576
SDP33298.1
Amino acid adenylation domain-containing protein.
    
  0.535
SDN47879.1
Phosphopantetheine attachment site.
    
  0.532
SDN47648.1
HxxPF-repeated domain-containing protein.
    
  0.516
SDN48047.1
Non-ribosomal peptide synthetase component F.
    
  0.510
Your Current Organism:
Streptomyces guanduensis
NCBI taxonomy Id: 310781
Other names: CGMCC 4.2022, JCM 13274, NBRC 102070, S. guanduensis, Streptomyces guanduensis Xu et al. 2006, Streptomyces sp. 701, strain 701
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