STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO06115.1Cyclase. (108 aa)    
Predicted Functional Partners:
SDO06143.1
Aromatase.
 
     0.954
SDO06260.1
Putative monooxygenase.
 
     0.915
SDP34373.1
Aromatase.
 
  
  0.892
SDO06290.1
SchA/CurD like domain-containing protein.
    
 0.809
SDO06206.1
Minimal PKS chain-length factor (CLF/KS beta); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.808
SDO06175.1
Minimal PKS acyl carrier protein.
       0.801
SDP34343.1
Oxygenase.
    
  0.779
SDO06232.1
Minimal PKS ketosynthase (KS/KS alpha); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.774
SDP34428.1
Act minimal PKS acyl carrier protein.
 
     0.764
SDP34318.1
Bifunctional hydroxylase/dehydrase.
 
  
  0.717
Your Current Organism:
Streptomyces guanduensis
NCBI taxonomy Id: 310781
Other names: CGMCC 4.2022, JCM 13274, NBRC 102070, S. guanduensis, Streptomyces guanduensis Xu et al. 2006, Streptomyces sp. 701, strain 701
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.