STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO09552.1Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (335 aa)    
Predicted Functional Partners:
SDO09576.1
Rod shape-determining protein MreD.
 
 
 0.999
SDO09525.1
Rod shape-determining protein MreB.
 
 
 0.998
SDO09600.1
Penicillin-binding protein 2.
 
 
 0.997
SDO09622.1
Rod shape determining protein RodA; Belongs to the SEDS family.
 
  
 0.990
SDN95266.1
Rod shape-determining protein MreB.
 
 
 0.986
SDN71753.1
Peptidoglycan synthetase FtsI.
 
 
 0.861
SDN23155.1
Peptidoglycan glycosyltransferase.
 
 
 0.822
SDM95935.1
Cell elongation-specific peptidoglycan D,D-transpeptidase.
 
 
 0.814
SDO73654.1
Protein RodZ, contains Xre-like HTH and DUF4115 domains.
 
 
 
 0.811
SDN88405.1
NTF2-like N-terminal transpeptidase domain-containing protein.
 
 
 0.765
Your Current Organism:
Streptomyces guanduensis
NCBI taxonomy Id: 310781
Other names: CGMCC 4.2022, JCM 13274, NBRC 102070, S. guanduensis, Streptomyces guanduensis Xu et al. 2006, Streptomyces sp. 701, strain 701
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.