STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO23252.1LexA-binding, inner membrane-associated putative hydrolase. (263 aa)    
Predicted Functional Partners:
SDO23221.1
Helicase conserved C-terminal domain-containing protein.
       0.802
SDO52216.1
FhuF 2Fe-2S C-terminal domain-containing protein.
  
     0.723
SDN18749.1
Hypothetical protein.
  
     0.639
SDN64156.1
Protein of unknown function.
  
     0.636
SDN64474.1
Helix-turn-helix domain-containing protein.
  
    0.614
SDN30576.1
Hypothetical protein.
  
     0.601
SDN32056.1
Protein of unknown function.
  
     0.591
SDO07180.1
acyl-CoA thioesterase-2.
       0.571
SDO05541.1
M6 family metalloprotease domain-containing protein.
  
     0.554
SDN19347.1
Hypothetical protein.
  
     0.553
Your Current Organism:
Streptomyces guanduensis
NCBI taxonomy Id: 310781
Other names: CGMCC 4.2022, JCM 13274, NBRC 102070, S. guanduensis, Streptomyces guanduensis Xu et al. 2006, Streptomyces sp. 701, strain 701
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.