STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO25573.1Hypothetical protein. (190 aa)    
Predicted Functional Partners:
SDO25545.1
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.847
SDO25521.1
Hopene-associated glycosyltransferase HpnB.
       0.764
SDN31966.1
Tetratricopeptide repeat-containing protein.
  
     0.684
SDN31748.1
KAP family P-loop domain-containing protein.
  
     0.678
SDO08951.1
Hypothetical protein.
  
     0.667
SDO54042.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
  
     0.648
SDP25987.1
Hypothetical protein.
  
     0.574
SDO25622.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
       0.571
SDO63015.1
Hypothetical protein.
  
     0.570
SDN09321.1
Asparagine synthase.
  
     0.550
Your Current Organism:
Streptomyces guanduensis
NCBI taxonomy Id: 310781
Other names: CGMCC 4.2022, JCM 13274, NBRC 102070, S. guanduensis, Streptomyces guanduensis Xu et al. 2006, Streptomyces sp. 701, strain 701
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.