STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO55406.1Phospholipase C. (735 aa)    
Predicted Functional Partners:
SDM75819.1
Phospholipase C.
  
  
 
0.749
SDN04497.1
Phospholipase C.
  
  
 
0.724
SDP05479.1
Glycerophosphoryl diester phosphodiesterase.
   
 
  0.552
SDN71484.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
     
 0.506
SDO55428.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.491
SDO55460.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
       0.491
SDO55492.1
Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD (putrescine degradation), contains GATase1-like domain.
       0.491
SDO55521.1
Glutamine synthetase.
       0.491
SDO55546.1
Amino acid/polyamine/organocation transporter, APC superfamily.
       0.491
cobB-2
NAD-dependent protein deacetylase, SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
       0.465
Your Current Organism:
Streptomyces guanduensis
NCBI taxonomy Id: 310781
Other names: CGMCC 4.2022, JCM 13274, NBRC 102070, S. guanduensis, Streptomyces guanduensis Xu et al. 2006, Streptomyces sp. 701, strain 701
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