STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO65005.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (321 aa)    
Predicted Functional Partners:
SDN48022.1
Phosphopantetheine attachment site.
  
 0.949
SDP35570.1
Acyl transferase domain-containing protein.
  
 0.817
SDP33324.1
Phosphopantetheine attachment site.
  
 0.787
SDO65039.1
Protease I.
  
    0.776
SDP33298.1
Amino acid adenylation domain-containing protein.
  
 0.763
SDN96255.1
Pristinamycin I synthase-3 and 4.
  
 0.754
SDN96291.1
Amino acid adenylation domain-containing protein.
  
 0.754
SDN73486.1
Glutamate synthase (NADH) large subunit.
     
 0.715
SDO37327.1
Acyl transferase domain-containing protein.
  
 0.643
SDN48448.1
Acyl transferase domain-containing protein.
  
 0.627
Your Current Organism:
Streptomyces guanduensis
NCBI taxonomy Id: 310781
Other names: CGMCC 4.2022, JCM 13274, NBRC 102070, S. guanduensis, Streptomyces guanduensis Xu et al. 2006, Streptomyces sp. 701, strain 701
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