Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN73486.1 | SDO94638.1 | SAMN05216259_105349 | SAMN05216259_114140 | Glutamate synthase (NADH) large subunit. | Iron-binding zinc finger CDGSH type. | 0.894 |
SDO20971.1 | SDO94638.1 | SAMN05216259_108139 | SAMN05216259_114140 | Cytochrome P450. | Iron-binding zinc finger CDGSH type. | 0.644 |
SDO69636.1 | SDO94638.1 | SAMN05216259_111272 | SAMN05216259_114140 | Hypothetical protein. | Iron-binding zinc finger CDGSH type. | 0.413 |
SDO94593.1 | SDO94638.1 | SAMN05216259_114139 | SAMN05216259_114140 | Release factor glutamine methyltransferase. | Iron-binding zinc finger CDGSH type. | 0.954 |
SDO94593.1 | SDO94674.1 | SAMN05216259_114139 | SAMN05216259_114141 | Release factor glutamine methyltransferase. | Iron-containing redox enzyme. | 0.938 |
SDO94593.1 | SDO94705.1 | SAMN05216259_114139 | SAMN05216259_114142 | Release factor glutamine methyltransferase. | DNA polymerase. | 0.781 |
SDO94593.1 | SDO94736.1 | SAMN05216259_114139 | SAMN05216259_114143 | Release factor glutamine methyltransferase. | Glutathione-independent formaldehyde dehydrogenase. | 0.484 |
SDO94638.1 | SDN73486.1 | SAMN05216259_114140 | SAMN05216259_105349 | Iron-binding zinc finger CDGSH type. | Glutamate synthase (NADH) large subunit. | 0.894 |
SDO94638.1 | SDO20971.1 | SAMN05216259_114140 | SAMN05216259_108139 | Iron-binding zinc finger CDGSH type. | Cytochrome P450. | 0.644 |
SDO94638.1 | SDO69636.1 | SAMN05216259_114140 | SAMN05216259_111272 | Iron-binding zinc finger CDGSH type. | Hypothetical protein. | 0.413 |
SDO94638.1 | SDO94593.1 | SAMN05216259_114140 | SAMN05216259_114139 | Iron-binding zinc finger CDGSH type. | Release factor glutamine methyltransferase. | 0.954 |
SDO94638.1 | SDO94674.1 | SAMN05216259_114140 | SAMN05216259_114141 | Iron-binding zinc finger CDGSH type. | Iron-containing redox enzyme. | 0.969 |
SDO94638.1 | SDO94705.1 | SAMN05216259_114140 | SAMN05216259_114142 | Iron-binding zinc finger CDGSH type. | DNA polymerase. | 0.800 |
SDO94638.1 | SDO94736.1 | SAMN05216259_114140 | SAMN05216259_114143 | Iron-binding zinc finger CDGSH type. | Glutathione-independent formaldehyde dehydrogenase. | 0.484 |
SDO94674.1 | SDO94593.1 | SAMN05216259_114141 | SAMN05216259_114139 | Iron-containing redox enzyme. | Release factor glutamine methyltransferase. | 0.938 |
SDO94674.1 | SDO94638.1 | SAMN05216259_114141 | SAMN05216259_114140 | Iron-containing redox enzyme. | Iron-binding zinc finger CDGSH type. | 0.969 |
SDO94674.1 | SDO94705.1 | SAMN05216259_114141 | SAMN05216259_114142 | Iron-containing redox enzyme. | DNA polymerase. | 0.812 |
SDO94674.1 | SDO94736.1 | SAMN05216259_114141 | SAMN05216259_114143 | Iron-containing redox enzyme. | Glutathione-independent formaldehyde dehydrogenase. | 0.484 |
SDO94705.1 | SDO94593.1 | SAMN05216259_114142 | SAMN05216259_114139 | DNA polymerase. | Release factor glutamine methyltransferase. | 0.781 |
SDO94705.1 | SDO94638.1 | SAMN05216259_114142 | SAMN05216259_114140 | DNA polymerase. | Iron-binding zinc finger CDGSH type. | 0.800 |
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