STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO98682.1Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. (113 aa)    
Predicted Functional Partners:
SDO98647.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
 
 0.999
SDM66807.1
GAF domain-containing protein.
 
 0.989
SDM69100.1
PAS domain S-box-containing protein.
 
 0.989
SDN54493.1
Histidine kinase-like ATPase domain-containing protein.
 
 0.989
SDP08918.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.989
SDP19071.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.989
SDM68382.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.988
SDO52920.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.988
SDM78770.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.985
SDO73558.1
PAS domain S-box-containing protein.
 
 0.985
Your Current Organism:
Streptomyces guanduensis
NCBI taxonomy Id: 310781
Other names: CGMCC 4.2022, JCM 13274, NBRC 102070, S. guanduensis, Streptomyces guanduensis Xu et al. 2006, Streptomyces sp. 701, strain 701
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.