STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP15812.1Transcriptional regulator, ArsR family. (336 aa)    
Predicted Functional Partners:
SDP15784.1
Major Facilitator Superfamily protein.
 
     0.760
SDP03533.1
Hypothetical protein.
  
     0.542
SDO33303.1
Protein of unknown function.
  
     0.515
SDM98808.1
ABC-2 type transport system permease protein.
  
     0.493
SDP11531.1
Helix-turn-helix domain-containing protein.
  
    0.488
SDN47410.1
Acyl carrier protein.
  
     0.474
SDP00314.1
Prevent-host-death family protein.
  
     0.471
SDO25300.1
Hypothetical protein.
  
     0.468
SDO62050.1
Hypothetical protein.
  
     0.465
SDO18278.1
Hypothetical protein.
  
     0.463
Your Current Organism:
Streptomyces guanduensis
NCBI taxonomy Id: 310781
Other names: CGMCC 4.2022, JCM 13274, NBRC 102070, S. guanduensis, Streptomyces guanduensis Xu et al. 2006, Streptomyces sp. 701, strain 701
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.