Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK54753.1 | SHK63701.1 | SAMN05216499_1012 | SAMN05216499_101230 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Hypothetical protein. | 0.676 |
SHK54753.1 | SHM13096.1 | SAMN05216499_1012 | SAMN05216499_108197 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.999 |
SHK54753.1 | sucC | SAMN05216499_1012 | SAMN05216499_101232 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.917 |
SHK54753.1 | sucD | SAMN05216499_1012 | SAMN05216499_101233 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.917 |
SHK63589.1 | SHK63631.1 | SAMN05216499_101227 | SAMN05216499_101228 | Hypothetical protein. | SWIM zinc finger. | 0.962 |
SHK63589.1 | SHK63664.1 | SAMN05216499_101227 | SAMN05216499_101229 | Hypothetical protein. | AAA domain (dynein-related subfamily). | 0.932 |
SHK63589.1 | SHK63701.1 | SAMN05216499_101227 | SAMN05216499_101230 | Hypothetical protein. | Hypothetical protein. | 0.933 |
SHK63589.1 | SHK63732.1 | SAMN05216499_101227 | SAMN05216499_101231 | Hypothetical protein. | VWA domain containing CoxE-like protein. | 0.932 |
SHK63589.1 | sucC | SAMN05216499_101227 | SAMN05216499_101232 | Hypothetical protein. | succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.434 |
SHK63631.1 | SHK63589.1 | SAMN05216499_101228 | SAMN05216499_101227 | SWIM zinc finger. | Hypothetical protein. | 0.962 |
SHK63631.1 | SHK63664.1 | SAMN05216499_101228 | SAMN05216499_101229 | SWIM zinc finger. | AAA domain (dynein-related subfamily). | 0.956 |
SHK63631.1 | SHK63701.1 | SAMN05216499_101228 | SAMN05216499_101230 | SWIM zinc finger. | Hypothetical protein. | 0.956 |
SHK63631.1 | SHK63732.1 | SAMN05216499_101228 | SAMN05216499_101231 | SWIM zinc finger. | VWA domain containing CoxE-like protein. | 0.956 |
SHK63631.1 | sucC | SAMN05216499_101228 | SAMN05216499_101232 | SWIM zinc finger. | succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.713 |
SHK63631.1 | sucD | SAMN05216499_101228 | SAMN05216499_101233 | SWIM zinc finger. | succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.587 |
SHK63664.1 | SHK63589.1 | SAMN05216499_101229 | SAMN05216499_101227 | AAA domain (dynein-related subfamily). | Hypothetical protein. | 0.932 |
SHK63664.1 | SHK63631.1 | SAMN05216499_101229 | SAMN05216499_101228 | AAA domain (dynein-related subfamily). | SWIM zinc finger. | 0.956 |
SHK63664.1 | SHK63701.1 | SAMN05216499_101229 | SAMN05216499_101230 | AAA domain (dynein-related subfamily). | Hypothetical protein. | 0.990 |
SHK63664.1 | SHK63732.1 | SAMN05216499_101229 | SAMN05216499_101231 | AAA domain (dynein-related subfamily). | VWA domain containing CoxE-like protein. | 0.991 |
SHK63664.1 | sucC | SAMN05216499_101229 | SAMN05216499_101232 | AAA domain (dynein-related subfamily). | succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.787 |
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