STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK69077.1Transglycosylase SLT domain-containing protein. (225 aa)    
Predicted Functional Partners:
SHK90645.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.950
SHL81436.1
Tetratricopeptide repeat-containing protein.
   
   0.927
SHN25216.1
Signal transduction histidine kinase.
  
 
 0.926
SHL48196.1
Peptidase family M48.
 
 
   0.816
SHL94528.1
Hypothetical protein.
   
   0.787
SHM07680.1
Tetratricopeptide repeat-containing protein.
   
   0.787
SHM33937.1
Hypothetical protein.
   
   0.787
SHN31578.1
Hypothetical protein.
   
   0.787
SHK69113.1
Predicted PurR-regulated permease PerM.
       0.619
SHL97379.1
Uncharacterized conserved protein YabE, contains G5 and tandem DUF348 domains.
    
 0.612
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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