Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK69077.1 | SHK69113.1 | SAMN05216499_101379 | SAMN05216499_101380 | Transglycosylase SLT domain-containing protein. | Predicted PurR-regulated permease PerM. | 0.619 |
SHK69077.1 | SHK90645.1 | SAMN05216499_101379 | SAMN05216499_10240 | Transglycosylase SLT domain-containing protein. | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.950 |
SHK69077.1 | SHL48196.1 | SAMN05216499_101379 | SAMN05216499_104238 | Transglycosylase SLT domain-containing protein. | Peptidase family M48. | 0.816 |
SHK69077.1 | SHL81436.1 | SAMN05216499_101379 | SAMN05216499_106139 | Transglycosylase SLT domain-containing protein. | Tetratricopeptide repeat-containing protein. | 0.927 |
SHK69077.1 | SHL94528.1 | SAMN05216499_101379 | SAMN05216499_10766 | Transglycosylase SLT domain-containing protein. | Hypothetical protein. | 0.787 |
SHK69077.1 | SHL97379.1 | SAMN05216499_101379 | SAMN05216499_107150 | Transglycosylase SLT domain-containing protein. | Uncharacterized conserved protein YabE, contains G5 and tandem DUF348 domains. | 0.612 |
SHK69077.1 | SHM07680.1 | SAMN05216499_101379 | SAMN05216499_10860 | Transglycosylase SLT domain-containing protein. | Tetratricopeptide repeat-containing protein. | 0.787 |
SHK69077.1 | SHM33937.1 | SAMN05216499_101379 | SAMN05216499_11098 | Transglycosylase SLT domain-containing protein. | Hypothetical protein. | 0.787 |
SHK69077.1 | SHN25216.1 | SAMN05216499_101379 | SAMN05216499_1296 | Transglycosylase SLT domain-containing protein. | Signal transduction histidine kinase. | 0.926 |
SHK69077.1 | SHN31578.1 | SAMN05216499_101379 | SAMN05216499_13633 | Transglycosylase SLT domain-containing protein. | Hypothetical protein. | 0.787 |
SHK69113.1 | SHK69077.1 | SAMN05216499_101380 | SAMN05216499_101379 | Predicted PurR-regulated permease PerM. | Transglycosylase SLT domain-containing protein. | 0.619 |
SHK90645.1 | SHK69077.1 | SAMN05216499_10240 | SAMN05216499_101379 | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Transglycosylase SLT domain-containing protein. | 0.950 |
SHL48196.1 | SHK69077.1 | SAMN05216499_104238 | SAMN05216499_101379 | Peptidase family M48. | Transglycosylase SLT domain-containing protein. | 0.816 |
SHL48196.1 | SHN25216.1 | SAMN05216499_104238 | SAMN05216499_1296 | Peptidase family M48. | Signal transduction histidine kinase. | 0.899 |
SHL81436.1 | SHK69077.1 | SAMN05216499_106139 | SAMN05216499_101379 | Tetratricopeptide repeat-containing protein. | Transglycosylase SLT domain-containing protein. | 0.927 |
SHL81436.1 | SHN25216.1 | SAMN05216499_106139 | SAMN05216499_1296 | Tetratricopeptide repeat-containing protein. | Signal transduction histidine kinase. | 0.911 |
SHL94528.1 | SHK69077.1 | SAMN05216499_10766 | SAMN05216499_101379 | Hypothetical protein. | Transglycosylase SLT domain-containing protein. | 0.787 |
SHL94528.1 | SHN25216.1 | SAMN05216499_10766 | SAMN05216499_1296 | Hypothetical protein. | Signal transduction histidine kinase. | 0.899 |
SHL97379.1 | SHK69077.1 | SAMN05216499_107150 | SAMN05216499_101379 | Uncharacterized conserved protein YabE, contains G5 and tandem DUF348 domains. | Transglycosylase SLT domain-containing protein. | 0.612 |
SHM07680.1 | SHK69077.1 | SAMN05216499_10860 | SAMN05216499_101379 | Tetratricopeptide repeat-containing protein. | Transglycosylase SLT domain-containing protein. | 0.787 |
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