Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK69713.1 | SHK69778.1 | SAMN05216499_101399 | SAMN05216499_101401 | Hypothetical protein. | Polyphosphate glucokinase. | 0.417 |
SHK69713.1 | SHN22797.1 | SAMN05216499_101399 | SAMN05216499_12740 | Hypothetical protein. | Hypothetical protein. | 0.570 |
SHK69713.1 | SHN22805.1 | SAMN05216499_101399 | SAMN05216499_12741 | Hypothetical protein. | Hypothetical protein. | 0.570 |
SHK69713.1 | SHN22824.1 | SAMN05216499_101399 | SAMN05216499_12743 | Hypothetical protein. | Hypothetical protein. | 0.571 |
SHK69713.1 | ispH | SAMN05216499_101399 | SAMN05216499_101400 | Hypothetical protein. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.592 |
SHK69713.1 | xseA | SAMN05216499_101399 | SAMN05216499_101398 | Hypothetical protein. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.541 |
SHK69778.1 | SHK69713.1 | SAMN05216499_101401 | SAMN05216499_101399 | Polyphosphate glucokinase. | Hypothetical protein. | 0.417 |
SHK69778.1 | ispH | SAMN05216499_101401 | SAMN05216499_101400 | Polyphosphate glucokinase. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.802 |
SHK69778.1 | xseA | SAMN05216499_101401 | SAMN05216499_101398 | Polyphosphate glucokinase. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.714 |
SHN22797.1 | SHK69713.1 | SAMN05216499_12740 | SAMN05216499_101399 | Hypothetical protein. | Hypothetical protein. | 0.570 |
SHN22797.1 | SHN22805.1 | SAMN05216499_12740 | SAMN05216499_12741 | Hypothetical protein. | Hypothetical protein. | 0.983 |
SHN22797.1 | SHN22824.1 | SAMN05216499_12740 | SAMN05216499_12743 | Hypothetical protein. | Hypothetical protein. | 0.980 |
SHN22805.1 | SHK69713.1 | SAMN05216499_12741 | SAMN05216499_101399 | Hypothetical protein. | Hypothetical protein. | 0.570 |
SHN22805.1 | SHN22797.1 | SAMN05216499_12741 | SAMN05216499_12740 | Hypothetical protein. | Hypothetical protein. | 0.983 |
SHN22805.1 | SHN22824.1 | SAMN05216499_12741 | SAMN05216499_12743 | Hypothetical protein. | Hypothetical protein. | 0.986 |
SHN22824.1 | SHK69713.1 | SAMN05216499_12743 | SAMN05216499_101399 | Hypothetical protein. | Hypothetical protein. | 0.571 |
SHN22824.1 | SHN22797.1 | SAMN05216499_12743 | SAMN05216499_12740 | Hypothetical protein. | Hypothetical protein. | 0.980 |
SHN22824.1 | SHN22805.1 | SAMN05216499_12743 | SAMN05216499_12741 | Hypothetical protein. | Hypothetical protein. | 0.986 |
ispH | SHK69713.1 | SAMN05216499_101400 | SAMN05216499_101399 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | Hypothetical protein. | 0.592 |
ispH | SHK69778.1 | SAMN05216499_101400 | SAMN05216499_101401 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | Polyphosphate glucokinase. | 0.802 |
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