STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK70580.1Septum formation. (326 aa)    
Predicted Functional Partners:
SHK70616.1
DNA-binding transcriptional regulator, GntR family.
       0.515
SHK70549.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
       0.486
SHN06380.1
FBP C-terminal treble-clef zinc-finger.
  
     0.473
SHN25216.1
Signal transduction histidine kinase.
  
 
 0.468
SHK58514.1
Protein of unknown function.
 
     0.453
SHM98141.1
PPOX class probable F420-dependent enzyme.
  
     0.404
SHN36245.1
Trypsin-like peptidase domain-containing protein.
    
   0.400
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.