STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK54869.1Signal transduction histidine kinase. (450 aa)    
Predicted Functional Partners:
SHN25216.1
Signal transduction histidine kinase.
  
 0.952
SHK54797.1
Two component transcriptional regulator, LuxR family.
 
 0.927
SHL28865.1
Two component transcriptional regulator, LuxR family.
 
 0.883
SHN16235.1
Signal transduction histidine kinase.
  
  
 0.794
SHN08201.1
Two component transcriptional regulator, LuxR family.
 
 0.777
SHL02775.1
Two component transcriptional regulator, LuxR family.
 
 0.766
SHN32867.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.760
SHK95457.1
Histidine kinase.
  
  
  0.757
SHM66596.1
Signal transduction histidine kinase.
  
  
  0.757
SHM45399.1
Two component transcriptional regulator, LuxR family.
 
 0.753
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.