STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK73595.1Glycosyltransferase involved in cell wall bisynthesis. (564 aa)    
Predicted Functional Partners:
SHK73711.1
Spherulation-specific family 4.
 
     0.871
SHK73671.1
Nucleoside-diphosphate-sugar epimerase.
 
    0.862
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.799
SHM76772.1
Maltooligosyltrehalose trehalohydrolase.
   
 0.795
SHK73634.1
Hypothetical protein.
       0.767
SHK74000.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
    
 
 0.763
SHL30900.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.685
SHN37779.1
Mannose-1-phosphate guanylyltransferase / phosphomannomutase.
  
 0.683
SHL39436.1
Spherulation-specific family 4.
 
     0.682
SHL39464.1
Nucleoside-diphosphate-sugar epimerase.
 
    0.666
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.