STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK75042.1Transcriptional regulator, TetR family. (206 aa)    
Predicted Functional Partners:
SHK74999.1
Histidinol-phosphatase.
       0.800
SHK74959.1
CBS domain-containing protein.
       0.724
SHM80800.1
Iron-binding zinc finger CDGSH type.
  
     0.620
SHL67528.1
Hypothetical protein.
  
     0.529
SHK78179.1
P-aminobenzoate N-oxygenase AurF.
  
     0.526
SHL96562.1
MerR HTH family regulatory protein.
  
     0.512
SHN33240.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
     0.509
SHM80773.1
Iron-containing redox enzyme.
  
     0.491
SHN33250.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
     0.490
SHN33229.1
Virulence factor Mce family protein.
  
     0.484
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.