Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHK77463.1 | SHK77504.1 | SAMN05216499_101603 | SAMN05216499_101604 | Signal transduction histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.984 |
| SHK77463.1 | SHK77542.1 | SAMN05216499_101603 | SAMN05216499_101605 | Signal transduction histidine kinase. | Hypothetical protein. | 0.798 |
| SHK77463.1 | SHK77590.1 | SAMN05216499_101603 | SAMN05216499_101606 | Signal transduction histidine kinase. | Nucleotidyltransferase domain-containing protein. | 0.457 |
| SHK77463.1 | SHK77630.1 | SAMN05216499_101603 | SAMN05216499_101607 | Signal transduction histidine kinase. | Acetyltransferase (GNAT) family protein. | 0.457 |
| SHK77463.1 | SHL51140.1 | SAMN05216499_101603 | SAMN05216499_104305 | Signal transduction histidine kinase. | AAA ATPase domain-containing protein. | 0.526 |
| SHK77463.1 | lon | SAMN05216499_101603 | SAMN05216499_101608 | Signal transduction histidine kinase. | ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.709 |
| SHK77504.1 | SHK77463.1 | SAMN05216499_101604 | SAMN05216499_101603 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Signal transduction histidine kinase. | 0.984 |
| SHK77504.1 | SHK77542.1 | SAMN05216499_101604 | SAMN05216499_101605 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Hypothetical protein. | 0.798 |
| SHK77504.1 | SHK77590.1 | SAMN05216499_101604 | SAMN05216499_101606 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Nucleotidyltransferase domain-containing protein. | 0.457 |
| SHK77504.1 | SHK77630.1 | SAMN05216499_101604 | SAMN05216499_101607 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Acetyltransferase (GNAT) family protein. | 0.457 |
| SHK77504.1 | lon | SAMN05216499_101604 | SAMN05216499_101608 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.708 |
| SHK77542.1 | SHK77463.1 | SAMN05216499_101605 | SAMN05216499_101603 | Hypothetical protein. | Signal transduction histidine kinase. | 0.798 |
| SHK77542.1 | SHK77504.1 | SAMN05216499_101605 | SAMN05216499_101604 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.798 |
| SHK77542.1 | SHK77590.1 | SAMN05216499_101605 | SAMN05216499_101606 | Hypothetical protein. | Nucleotidyltransferase domain-containing protein. | 0.671 |
| SHK77542.1 | SHK77630.1 | SAMN05216499_101605 | SAMN05216499_101607 | Hypothetical protein. | Acetyltransferase (GNAT) family protein. | 0.713 |
| SHK77542.1 | lon | SAMN05216499_101605 | SAMN05216499_101608 | Hypothetical protein. | ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.753 |
| SHK77590.1 | SHK77463.1 | SAMN05216499_101606 | SAMN05216499_101603 | Nucleotidyltransferase domain-containing protein. | Signal transduction histidine kinase. | 0.457 |
| SHK77590.1 | SHK77504.1 | SAMN05216499_101606 | SAMN05216499_101604 | Nucleotidyltransferase domain-containing protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.457 |
| SHK77590.1 | SHK77542.1 | SAMN05216499_101606 | SAMN05216499_101605 | Nucleotidyltransferase domain-containing protein. | Hypothetical protein. | 0.671 |
| SHK77590.1 | SHK77630.1 | SAMN05216499_101606 | SAMN05216499_101607 | Nucleotidyltransferase domain-containing protein. | Acetyltransferase (GNAT) family protein. | 0.811 |
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