Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK94345.1 | SHK94379.1 | SAMN05216499_102142 | SAMN05216499_102143 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.816 |
SHK94345.1 | SHK94424.1 | SAMN05216499_102142 | SAMN05216499_102144 | Hypothetical protein. | Signal transduction histidine kinase. | 0.816 |
SHK94345.1 | SHK94462.1 | SAMN05216499_102142 | SAMN05216499_102145 | Hypothetical protein. | Chitinase family 18. | 0.442 |
SHK94379.1 | SHK94345.1 | SAMN05216499_102143 | SAMN05216499_102142 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Hypothetical protein. | 0.816 |
SHK94379.1 | SHK94424.1 | SAMN05216499_102143 | SAMN05216499_102144 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Signal transduction histidine kinase. | 0.984 |
SHK94379.1 | SHK94462.1 | SAMN05216499_102143 | SAMN05216499_102145 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Chitinase family 18. | 0.787 |
SHK94424.1 | SHK94345.1 | SAMN05216499_102144 | SAMN05216499_102142 | Signal transduction histidine kinase. | Hypothetical protein. | 0.816 |
SHK94424.1 | SHK94379.1 | SAMN05216499_102144 | SAMN05216499_102143 | Signal transduction histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.984 |
SHK94424.1 | SHK94462.1 | SAMN05216499_102144 | SAMN05216499_102145 | Signal transduction histidine kinase. | Chitinase family 18. | 0.787 |
SHK94462.1 | SHK94345.1 | SAMN05216499_102145 | SAMN05216499_102142 | Chitinase family 18. | Hypothetical protein. | 0.442 |
SHK94462.1 | SHK94379.1 | SAMN05216499_102145 | SAMN05216499_102143 | Chitinase family 18. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.787 |
SHK94462.1 | SHK94424.1 | SAMN05216499_102145 | SAMN05216499_102144 | Chitinase family 18. | Signal transduction histidine kinase. | 0.787 |