STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK99267.1Transcriptional regulator, TetR family. (208 aa)    
Predicted Functional Partners:
SHM19514.1
Cellulose binding domain-containing protein.
  
     0.626
SHM86658.1
Glycosyl hydrolases family 39.
  
     0.599
SHN10270.1
Ricin-type beta-trefoil lectin domain-like.
  
     0.578
SHL23465.1
Adenine phosphoribosyltransferase/orotate phosphoribosyltransferase.
  
 
   0.574
SHK99235.1
Carboxymuconolactone decarboxylase family protein.
       0.550
SHK99299.1
Hypothetical protein.
       0.548
SHL41459.1
Hypothetical protein.
  
     0.518
SHN24469.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.501
SHN00825.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.484
SHL28085.1
DNA-binding transcriptional regulator, MarR family.
  
     0.446
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.