Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK73276.1 | SHK99374.1 | SAMN05216499_101499 | SAMN05216499_102269 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Ribonuclease E. | 0.718 |
SHK73276.1 | eno | SAMN05216499_101499 | SAMN05216499_107196 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.513 |
SHK73276.1 | eno-2 | SAMN05216499_101499 | SAMN05216499_119101 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.513 |
SHK73276.1 | pnp | SAMN05216499_101499 | SAMN05216499_1138 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.915 |
SHK99342.1 | SHK99374.1 | SAMN05216499_102268 | SAMN05216499_102269 | Radical SAM-linked protein. | Ribonuclease E. | 0.763 |
SHK99374.1 | SHK73276.1 | SAMN05216499_102269 | SAMN05216499_101499 | Ribonuclease E. | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | 0.718 |
SHK99374.1 | SHK99342.1 | SAMN05216499_102269 | SAMN05216499_102268 | Ribonuclease E. | Radical SAM-linked protein. | 0.763 |
SHK99374.1 | SHL64707.1 | SAMN05216499_102269 | SAMN05216499_105197 | Ribonuclease E. | spoIIIJ-associated protein. | 0.767 |
SHK99374.1 | SHL80903.1 | SAMN05216499_102269 | SAMN05216499_106124 | Ribonuclease E. | UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities. | 0.848 |
SHK99374.1 | SHL98723.1 | SAMN05216499_102269 | SAMN05216499_107186 | Ribonuclease E. | Hypothetical protein. | 0.767 |
SHK99374.1 | SHM68940.1 | SAMN05216499_102269 | SAMN05216499_11397 | Ribonuclease E. | RNA-binding protein (KH domain); Belongs to the UPF0109 family. | 0.843 |
SHK99374.1 | SHN34556.1 | SAMN05216499_102269 | SAMN05216499_14132 | Ribonuclease E. | UPF0042 nucleotide-binding protein. | 0.848 |
SHK99374.1 | eno | SAMN05216499_102269 | SAMN05216499_107196 | Ribonuclease E. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.876 |
SHK99374.1 | eno-2 | SAMN05216499_102269 | SAMN05216499_119101 | Ribonuclease E. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.876 |
SHK99374.1 | pnp | SAMN05216499_102269 | SAMN05216499_1138 | Ribonuclease E. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.987 |
SHL64707.1 | SHK99374.1 | SAMN05216499_105197 | SAMN05216499_102269 | spoIIIJ-associated protein. | Ribonuclease E. | 0.767 |
SHL64707.1 | SHM68940.1 | SAMN05216499_105197 | SAMN05216499_11397 | spoIIIJ-associated protein. | RNA-binding protein (KH domain); Belongs to the UPF0109 family. | 0.984 |
SHL64707.1 | pnp | SAMN05216499_105197 | SAMN05216499_1138 | spoIIIJ-associated protein. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.414 |
SHL80903.1 | SHK99374.1 | SAMN05216499_106124 | SAMN05216499_102269 | UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities. | Ribonuclease E. | 0.848 |
SHL98723.1 | SHK99374.1 | SAMN05216499_107186 | SAMN05216499_102269 | Hypothetical protein. | Ribonuclease E. | 0.767 |
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