Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK64382.1 | SHL82262.1 | SAMN05216499_101248 | SAMN05216499_106163 | Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glutamate synthase (NADH) large subunit. | 0.583 |
SHK64382.1 | SHM71745.1 | SAMN05216499_101248 | SAMN05216499_113163 | Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.941 |
SHK64382.1 | SHN30877.1 | SAMN05216499_101248 | SAMN05216499_13537 | Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.930 |
SHK64382.1 | argB | SAMN05216499_101248 | SAMN05216499_111147 | Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.942 |
SHK64382.1 | proA | SAMN05216499_101248 | SAMN05216499_102291 | Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.529 |
SHK64382.1 | proB | SAMN05216499_101248 | SAMN05216499_102289 | Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.935 |
SHL00182.1 | SHL00251.1 | SAMN05216499_102290 | SAMN05216499_102292 | Hypothetical protein. | Hypothetical protein. | 0.749 |
SHL00182.1 | proA | SAMN05216499_102290 | SAMN05216499_102291 | Hypothetical protein. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.823 |
SHL00182.1 | proB | SAMN05216499_102290 | SAMN05216499_102289 | Hypothetical protein. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.776 |
SHL00251.1 | SHL00182.1 | SAMN05216499_102292 | SAMN05216499_102290 | Hypothetical protein. | Hypothetical protein. | 0.749 |
SHL00251.1 | proA | SAMN05216499_102292 | SAMN05216499_102291 | Hypothetical protein. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.795 |
SHL00251.1 | proB | SAMN05216499_102292 | SAMN05216499_102289 | Hypothetical protein. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.696 |
SHL82262.1 | SHK64382.1 | SAMN05216499_106163 | SAMN05216499_101248 | Glutamate synthase (NADH) large subunit. | Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.583 |
SHL82262.1 | SHM71745.1 | SAMN05216499_106163 | SAMN05216499_113163 | Glutamate synthase (NADH) large subunit. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.949 |
SHL82262.1 | SHN30877.1 | SAMN05216499_106163 | SAMN05216499_13537 | Glutamate synthase (NADH) large subunit. | Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.583 |
SHL82262.1 | argB | SAMN05216499_106163 | SAMN05216499_111147 | Glutamate synthase (NADH) large subunit. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.863 |
SHL82262.1 | argD | SAMN05216499_106163 | SAMN05216499_111148 | Glutamate synthase (NADH) large subunit. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.583 |
SHL82262.1 | proA | SAMN05216499_106163 | SAMN05216499_102291 | Glutamate synthase (NADH) large subunit. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.959 |
SHL82262.1 | proB | SAMN05216499_106163 | SAMN05216499_102289 | Glutamate synthase (NADH) large subunit. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.828 |
SHL82262.1 | proC | SAMN05216499_106163 | SAMN05216499_123126 | Glutamate synthase (NADH) large subunit. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.628 |
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