STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK89063.1Hypothetical protein. (481 aa)    
Predicted Functional Partners:
mtnA
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
       0.810
SHK89183.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 
     0.770
SHK89253.1
Predicted amidophosphoribosyltransferases.
 
     0.737
SHK89142.1
Two-component system, OmpR family, response regulator MtrA.
       0.729
SHK89215.1
Lipoprotein LpqB beta-propeller domain-containing protein.
       0.729
SHN24582.1
MoxR-like ATPase.
       0.603
SHL25874.1
Histidine kinase-like ATPase domain-containing protein.
  
     0.516
SHM47374.1
Hypothetical protein.
  
     0.506
SHN16463.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
     0.480
SHL29821.1
Protein of unknown function.
  
     0.446
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.