Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK65958.1 | SHL02151.1 | SAMN05216499_101294 | SAMN05216499_102340 | Thymidine phosphorylase. | Cytidine deaminase. | 0.830 |
SHK65958.1 | SHN22862.1 | SAMN05216499_101294 | SAMN05216499_12747 | Thymidine phosphorylase. | Putative hydrolase of the HAD superfamily. | 0.407 |
SHK65958.1 | era | SAMN05216499_101294 | SAMN05216499_102343 | Thymidine phosphorylase. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.533 |
SHK65958.1 | tdk | SAMN05216499_101294 | SAMN05216499_12532 | Thymidine phosphorylase. | Thymidine kinase. | 0.962 |
SHK92192.1 | SHL02151.1 | SAMN05216499_10282 | SAMN05216499_102340 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Cytidine deaminase. | 0.766 |
SHK92192.1 | SHN13940.1 | SAMN05216499_10282 | SAMN05216499_12245 | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | Protein of unknown function. | 0.732 |
SHL01977.1 | SHL02151.1 | SAMN05216499_102336 | SAMN05216499_102340 | Phosphate starvation-inducible protein PhoH. | Cytidine deaminase. | 0.781 |
SHL01977.1 | era | SAMN05216499_102336 | SAMN05216499_102343 | Phosphate starvation-inducible protein PhoH. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.827 |
SHL01977.1 | ybeY | SAMN05216499_102336 | SAMN05216499_102337 | Phosphate starvation-inducible protein PhoH. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.991 |
SHL02151.1 | SHK65958.1 | SAMN05216499_102340 | SAMN05216499_101294 | Cytidine deaminase. | Thymidine phosphorylase. | 0.830 |
SHL02151.1 | SHK92192.1 | SAMN05216499_102340 | SAMN05216499_10282 | Cytidine deaminase. | Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif. | 0.766 |
SHL02151.1 | SHL01977.1 | SAMN05216499_102340 | SAMN05216499_102336 | Cytidine deaminase. | Phosphate starvation-inducible protein PhoH. | 0.781 |
SHL02151.1 | SHM31958.1 | SAMN05216499_102340 | SAMN05216499_11045 | Cytidine deaminase. | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | 0.694 |
SHL02151.1 | SHN13940.1 | SAMN05216499_102340 | SAMN05216499_12245 | Cytidine deaminase. | Protein of unknown function. | 0.769 |
SHL02151.1 | SHN22862.1 | SAMN05216499_102340 | SAMN05216499_12747 | Cytidine deaminase. | Putative hydrolase of the HAD superfamily. | 0.695 |
SHL02151.1 | era | SAMN05216499_102340 | SAMN05216499_102343 | Cytidine deaminase. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.930 |
SHL02151.1 | glyQS | SAMN05216499_102340 | SAMN05216499_102363 | Cytidine deaminase. | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.699 |
SHL02151.1 | tdk | SAMN05216499_102340 | SAMN05216499_12532 | Cytidine deaminase. | Thymidine kinase. | 0.756 |
SHL02151.1 | ybeY | SAMN05216499_102340 | SAMN05216499_102337 | Cytidine deaminase. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.920 |
SHM31958.1 | SHL02151.1 | SAMN05216499_11045 | SAMN05216499_102340 | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | Cytidine deaminase. | 0.694 |
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