STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL03942.1Sirohydrochlorin ferrochelatase. (258 aa)    
Predicted Functional Partners:
SHM49407.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 0.994
SHL78671.1
Cobalt-precorrin 5A hydrolase / precorrin-3B C17-methyltransferase.
 
  
 0.907
SHN22005.1
uroporphyrinogen-III synthase.
  
 
 0.900
SHM49324.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
 
  
 0.872
SHL78629.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
 
  
 0.868
SHL03967.1
dGTPase; Belongs to the dGTPase family. Type 2 subfamily.
       0.830
SHL78549.1
Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase.
 
  
 0.798
SHL03864.1
Protein SanA, affects membrane permeability for vancomycin.
       0.756
SHL04004.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
  
 0.749
SHK90819.1
uroporphyrinogen-III synthase.
 
 
 0.712
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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