Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL07081.1 | SHL07120.1 | SAMN05216499_102460 | SAMN05216499_102461 | Putative peptidoglycan binding domain-containing protein. | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | 0.551 |
SHL07081.1 | SHL07161.1 | SAMN05216499_102460 | SAMN05216499_102462 | Putative peptidoglycan binding domain-containing protein. | Hypothetical protein. | 0.400 |
SHL07120.1 | SHL07081.1 | SAMN05216499_102461 | SAMN05216499_102460 | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | Putative peptidoglycan binding domain-containing protein. | 0.551 |
SHL07120.1 | SHL07161.1 | SAMN05216499_102461 | SAMN05216499_102462 | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | Hypothetical protein. | 0.551 |
SHL07120.1 | SHL07194.1 | SAMN05216499_102461 | SAMN05216499_102463 | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | Hypothetical protein. | 0.551 |
SHL07120.1 | SHM12515.1 | SAMN05216499_102461 | SAMN05216499_108180 | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase C. | 0.560 |
SHL07120.1 | SHM45064.1 | SAMN05216499_102461 | SAMN05216499_11156 | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.419 |
SHL07120.1 | SHM83246.1 | SAMN05216499_102461 | SAMN05216499_1154 | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | Phosphopantetheine attachment site. | 0.425 |
SHL07120.1 | SHN25216.1 | SAMN05216499_102461 | SAMN05216499_1296 | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | Signal transduction histidine kinase. | 0.596 |
SHL07161.1 | SHL07081.1 | SAMN05216499_102462 | SAMN05216499_102460 | Hypothetical protein. | Putative peptidoglycan binding domain-containing protein. | 0.400 |
SHL07161.1 | SHL07120.1 | SAMN05216499_102462 | SAMN05216499_102461 | Hypothetical protein. | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | 0.551 |
SHL07161.1 | SHL07194.1 | SAMN05216499_102462 | SAMN05216499_102463 | Hypothetical protein. | Hypothetical protein. | 0.969 |
SHL07194.1 | SHL07120.1 | SAMN05216499_102463 | SAMN05216499_102461 | Hypothetical protein. | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | 0.551 |
SHL07194.1 | SHL07161.1 | SAMN05216499_102463 | SAMN05216499_102462 | Hypothetical protein. | Hypothetical protein. | 0.969 |
SHL07194.1 | SHM12515.1 | SAMN05216499_102463 | SAMN05216499_108180 | Hypothetical protein. | Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase C. | 0.895 |
SHL07194.1 | SHM45064.1 | SAMN05216499_102463 | SAMN05216499_11156 | Hypothetical protein. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.562 |
SHL07194.1 | SHM83246.1 | SAMN05216499_102463 | SAMN05216499_1154 | Hypothetical protein. | Phosphopantetheine attachment site. | 0.803 |
SHL07194.1 | SHN25216.1 | SAMN05216499_102463 | SAMN05216499_1296 | Hypothetical protein. | Signal transduction histidine kinase. | 0.618 |
SHM12515.1 | SHL07120.1 | SAMN05216499_108180 | SAMN05216499_102461 | Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase C. | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | 0.560 |
SHM12515.1 | SHL07194.1 | SAMN05216499_108180 | SAMN05216499_102463 | Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase C. | Hypothetical protein. | 0.895 |
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