Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK73671.1 | SHL30900.1 | SAMN05216499_101509 | SAMN05216499_103359 | Nucleoside-diphosphate-sugar epimerase. | Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. | 0.538 |
SHK73671.1 | SHL39464.1 | SAMN05216499_101509 | SAMN05216499_10429 | Nucleoside-diphosphate-sugar epimerase. | Nucleoside-diphosphate-sugar epimerase. | 0.925 |
SHK73671.1 | SHL39496.1 | SAMN05216499_101509 | SAMN05216499_10430 | Nucleoside-diphosphate-sugar epimerase. | Nucleotidyl transferase. | 0.682 |
SHK73671.1 | SHN37779.1 | SAMN05216499_101509 | SAMN05216499_1564 | Nucleoside-diphosphate-sugar epimerase. | Mannose-1-phosphate guanylyltransferase / phosphomannomutase. | 0.679 |
SHK73671.1 | fcl | SAMN05216499_101509 | SAMN05216499_102544 | Nucleoside-diphosphate-sugar epimerase. | GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. | 0.701 |
SHK73671.1 | gmd | SAMN05216499_101509 | SAMN05216499_102543 | Nucleoside-diphosphate-sugar epimerase. | GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.800 |
SHL09908.1 | SHL09947.1 | SAMN05216499_102540 | SAMN05216499_102541 | Glycosyl transferase family 2. | Hypothetical protein. | 0.886 |
SHL09908.1 | SHL30900.1 | SAMN05216499_102540 | SAMN05216499_103359 | Glycosyl transferase family 2. | Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. | 0.617 |
SHL09908.1 | SHN37779.1 | SAMN05216499_102540 | SAMN05216499_1564 | Glycosyl transferase family 2. | Mannose-1-phosphate guanylyltransferase / phosphomannomutase. | 0.603 |
SHL09908.1 | fcl | SAMN05216499_102540 | SAMN05216499_102544 | Glycosyl transferase family 2. | GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. | 0.683 |
SHL09908.1 | gmd | SAMN05216499_102540 | SAMN05216499_102543 | Glycosyl transferase family 2. | GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.860 |
SHL09947.1 | SHL09908.1 | SAMN05216499_102541 | SAMN05216499_102540 | Hypothetical protein. | Glycosyl transferase family 2. | 0.886 |
SHL09947.1 | fcl | SAMN05216499_102541 | SAMN05216499_102544 | Hypothetical protein. | GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. | 0.735 |
SHL09947.1 | gmd | SAMN05216499_102541 | SAMN05216499_102543 | Hypothetical protein. | GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.785 |
SHL30900.1 | SHK73671.1 | SAMN05216499_103359 | SAMN05216499_101509 | Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. | Nucleoside-diphosphate-sugar epimerase. | 0.538 |
SHL30900.1 | SHL09908.1 | SAMN05216499_103359 | SAMN05216499_102540 | Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. | Glycosyl transferase family 2. | 0.617 |
SHL30900.1 | SHL39464.1 | SAMN05216499_103359 | SAMN05216499_10429 | Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. | Nucleoside-diphosphate-sugar epimerase. | 0.591 |
SHL30900.1 | SHL39496.1 | SAMN05216499_103359 | SAMN05216499_10430 | Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. | Nucleotidyl transferase. | 0.604 |
SHL30900.1 | SHM83317.1 | SAMN05216499_103359 | SAMN05216499_1158 | Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. | 3-amino-5-hydroxybenzoate synthase; Belongs to the DegT/DnrJ/EryC1 family. | 0.966 |
SHL30900.1 | SHN18240.1 | SAMN05216499_103359 | SAMN05216499_12447 | Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.968 |
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