STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK91399.1Hypothetical protein. (274 aa)    
Predicted Functional Partners:
SHK91328.1
Hypothetical protein.
   
   0.923
SHN25216.1
Signal transduction histidine kinase.
   
 0.813
SHK91363.1
Hypothetical protein.
       0.782
SHN37798.1
FHA domain-containing protein.
    
 
 0.749
SHM38832.1
FHA domain-containing protein.
    
 
 0.728
SHN00743.1
Hypothetical protein.
  
     0.656
SHM07287.1
PAS/PAC sensor hybrid histidine kinase.
  
 
 0.653
SHN31027.1
Choline kinase.
  
     0.645
SHL58475.1
Helix-turn-helix domain-containing protein.
  
 
   0.621
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
       0.603
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.