Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL23465.1 | SHL23605.1 | SAMN05216499_103173 | SAMN05216499_103176 | Adenine phosphoribosyltransferase/orotate phosphoribosyltransferase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.829 |
SHL23465.1 | SHL86673.1 | SAMN05216499_103173 | SAMN05216499_106289 | Adenine phosphoribosyltransferase/orotate phosphoribosyltransferase. | Adenosine kinase. | 0.883 |
SHL23465.1 | SHM32140.1 | SAMN05216499_103173 | SAMN05216499_11050 | Adenine phosphoribosyltransferase/orotate phosphoribosyltransferase. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.856 |
SHL23465.1 | SHM56413.1 | SAMN05216499_103173 | SAMN05216499_11245 | Adenine phosphoribosyltransferase/orotate phosphoribosyltransferase. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.818 |
SHL23465.1 | SHN23980.1 | SAMN05216499_103173 | SAMN05216499_12833 | Adenine phosphoribosyltransferase/orotate phosphoribosyltransferase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.920 |
SHL23465.1 | adk | SAMN05216499_103173 | SAMN05216499_101152 | Adenine phosphoribosyltransferase/orotate phosphoribosyltransferase. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.839 |
SHL23465.1 | gmk | SAMN05216499_103173 | SAMN05216499_14030 | Adenine phosphoribosyltransferase/orotate phosphoribosyltransferase. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.903 |
SHL23465.1 | guaA | SAMN05216499_103173 | SAMN05216499_101206 | Adenine phosphoribosyltransferase/orotate phosphoribosyltransferase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.990 |
SHL23465.1 | guaB | SAMN05216499_103173 | SAMN05216499_101195 | Adenine phosphoribosyltransferase/orotate phosphoribosyltransferase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.886 |
SHL23465.1 | purH | SAMN05216499_103173 | SAMN05216499_101238 | Adenine phosphoribosyltransferase/orotate phosphoribosyltransferase. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.834 |
SHL23605.1 | SHL23465.1 | SAMN05216499_103176 | SAMN05216499_103173 | 3-oxoacyl-[acyl-carrier protein] reductase. | Adenine phosphoribosyltransferase/orotate phosphoribosyltransferase. | 0.829 |
SHL23605.1 | guaB | SAMN05216499_103176 | SAMN05216499_101195 | 3-oxoacyl-[acyl-carrier protein] reductase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.482 |
SHL86673.1 | SHL23465.1 | SAMN05216499_106289 | SAMN05216499_103173 | Adenosine kinase. | Adenine phosphoribosyltransferase/orotate phosphoribosyltransferase. | 0.883 |
SHL86673.1 | SHM32140.1 | SAMN05216499_106289 | SAMN05216499_11050 | Adenosine kinase. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.615 |
SHL86673.1 | SHM56413.1 | SAMN05216499_106289 | SAMN05216499_11245 | Adenosine kinase. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.566 |
SHL86673.1 | SHN23980.1 | SAMN05216499_106289 | SAMN05216499_12833 | Adenosine kinase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.958 |
SHL86673.1 | adk | SAMN05216499_106289 | SAMN05216499_101152 | Adenosine kinase. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.952 |
SHL86673.1 | gmk | SAMN05216499_106289 | SAMN05216499_14030 | Adenosine kinase. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.625 |
SHL86673.1 | guaA | SAMN05216499_106289 | SAMN05216499_101206 | Adenosine kinase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.744 |
SHL86673.1 | guaB | SAMN05216499_106289 | SAMN05216499_101195 | Adenosine kinase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.678 |
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