STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL26909.1Transporter, CPA2 family. (450 aa)    
Predicted Functional Partners:
SHN36870.1
NAD(P)H dehydrogenase (quinone).
  
 
 0.650
SHN25216.1
Signal transduction histidine kinase.
 
   
 0.510
SHM08434.1
Protein of unknown function.
  
     0.422
SHN29068.1
GAF sensor hybrid histidine kinase.
  
     0.418
SHM90449.1
Thaumatin family protein.
  
     0.417
SHM12439.1
Dehydrogenase (flavoprotein).
 
    0.410
SHN19873.1
Phosphocarrier protein HPr.
    
  0.409
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.