Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL29889.1 | SHL29931.1 | SAMN05216499_103334 | SAMN05216499_103335 | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.886 |
SHL29889.1 | SHL29970.1 | SAMN05216499_103334 | SAMN05216499_103336 | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | Cytochrome oxidase assembly protein ShyY1. | 0.815 |
SHL29931.1 | SHL29889.1 | SAMN05216499_103335 | SAMN05216499_103334 | Hypothetical protein. | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.886 |
SHL29931.1 | SHL29970.1 | SAMN05216499_103335 | SAMN05216499_103336 | Hypothetical protein. | Cytochrome oxidase assembly protein ShyY1. | 0.815 |
SHL29970.1 | SHL29889.1 | SAMN05216499_103336 | SAMN05216499_103334 | Cytochrome oxidase assembly protein ShyY1. | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.815 |
SHL29970.1 | SHL29931.1 | SAMN05216499_103336 | SAMN05216499_103335 | Cytochrome oxidase assembly protein ShyY1. | Hypothetical protein. | 0.815 |
SHL29970.1 | SHL80158.1 | SAMN05216499_103336 | SAMN05216499_106107 | Cytochrome oxidase assembly protein ShyY1. | Cytochrome c oxidase assembly protein subunit 15. | 0.928 |
SHL29970.1 | SHL86586.1 | SAMN05216499_103336 | SAMN05216499_106286 | Cytochrome oxidase assembly protein ShyY1. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.635 |
SHL29970.1 | SHL86616.1 | SAMN05216499_103336 | SAMN05216499_106287 | Cytochrome oxidase assembly protein ShyY1. | Cytochrome c oxidase subunit 2. | 0.746 |
SHL29970.1 | SHM47454.1 | SAMN05216499_103336 | SAMN05216499_111118 | Cytochrome oxidase assembly protein ShyY1. | SseB protein N-terminal domain-containing protein. | 0.661 |
SHL29970.1 | SHM89991.1 | SAMN05216499_103336 | SAMN05216499_11633 | Cytochrome oxidase assembly protein ShyY1. | Regulator of chromosome condensation (RCC1) repeat-containing protein. | 0.648 |
SHL29970.1 | SHN34319.1 | SAMN05216499_103336 | SAMN05216499_1411 | Cytochrome oxidase assembly protein ShyY1. | Hypothetical protein. | 0.648 |
SHL29970.1 | ctaB | SAMN05216499_103336 | SAMN05216499_106110 | Cytochrome oxidase assembly protein ShyY1. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.772 |
SHL29970.1 | secY | SAMN05216499_103336 | SAMN05216499_101151 | Cytochrome oxidase assembly protein ShyY1. | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.787 |
SHL80158.1 | SHL29970.1 | SAMN05216499_106107 | SAMN05216499_103336 | Cytochrome c oxidase assembly protein subunit 15. | Cytochrome oxidase assembly protein ShyY1. | 0.928 |
SHL80158.1 | SHL86586.1 | SAMN05216499_106107 | SAMN05216499_106286 | Cytochrome c oxidase assembly protein subunit 15. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.642 |
SHL80158.1 | SHL86616.1 | SAMN05216499_106107 | SAMN05216499_106287 | Cytochrome c oxidase assembly protein subunit 15. | Cytochrome c oxidase subunit 2. | 0.839 |
SHL80158.1 | ctaB | SAMN05216499_106107 | SAMN05216499_106110 | Cytochrome c oxidase assembly protein subunit 15. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.999 |
SHL86586.1 | SHL29970.1 | SAMN05216499_106286 | SAMN05216499_103336 | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Cytochrome oxidase assembly protein ShyY1. | 0.635 |
SHL86586.1 | SHL80158.1 | SAMN05216499_106286 | SAMN05216499_106107 | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Cytochrome c oxidase assembly protein subunit 15. | 0.642 |
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