Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL31974.1 | SHL32010.1 | SAMN05216499_103384 | SAMN05216499_103385 | Hypothetical protein. | Putative tRNA adenosine deaminase-associated protein. | 0.757 |
SHL31974.1 | SHL32102.1 | SAMN05216499_103384 | SAMN05216499_103388 | Hypothetical protein. | Hypothetical protein. | 0.671 |
SHL31974.1 | SHL32142.1 | SAMN05216499_103384 | SAMN05216499_103389 | Hypothetical protein. | Stress responsive A/B Barrel Domain. | 0.665 |
SHL31974.1 | SHL32190.1 | SAMN05216499_103384 | SAMN05216499_103390 | Hypothetical protein. | RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family. | 0.606 |
SHL31974.1 | tadA | SAMN05216499_103384 | SAMN05216499_103386 | Hypothetical protein. | tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.714 |
SHL31974.1 | upp | SAMN05216499_103384 | SAMN05216499_103383 | Hypothetical protein. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.798 |
SHL32010.1 | SHL31974.1 | SAMN05216499_103385 | SAMN05216499_103384 | Putative tRNA adenosine deaminase-associated protein. | Hypothetical protein. | 0.757 |
SHL32010.1 | SHL32102.1 | SAMN05216499_103385 | SAMN05216499_103388 | Putative tRNA adenosine deaminase-associated protein. | Hypothetical protein. | 0.708 |
SHL32010.1 | SHL32142.1 | SAMN05216499_103385 | SAMN05216499_103389 | Putative tRNA adenosine deaminase-associated protein. | Stress responsive A/B Barrel Domain. | 0.734 |
SHL32010.1 | SHL32190.1 | SAMN05216499_103385 | SAMN05216499_103390 | Putative tRNA adenosine deaminase-associated protein. | RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family. | 0.720 |
SHL32010.1 | tadA | SAMN05216499_103385 | SAMN05216499_103386 | Putative tRNA adenosine deaminase-associated protein. | tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.804 |
SHL32010.1 | upp | SAMN05216499_103385 | SAMN05216499_103383 | Putative tRNA adenosine deaminase-associated protein. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.711 |
SHL32102.1 | SHL31974.1 | SAMN05216499_103388 | SAMN05216499_103384 | Hypothetical protein. | Hypothetical protein. | 0.671 |
SHL32102.1 | SHL32010.1 | SAMN05216499_103388 | SAMN05216499_103385 | Hypothetical protein. | Putative tRNA adenosine deaminase-associated protein. | 0.708 |
SHL32102.1 | SHL32142.1 | SAMN05216499_103388 | SAMN05216499_103389 | Hypothetical protein. | Stress responsive A/B Barrel Domain. | 0.848 |
SHL32102.1 | SHL32190.1 | SAMN05216499_103388 | SAMN05216499_103390 | Hypothetical protein. | RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family. | 0.752 |
SHL32102.1 | tadA | SAMN05216499_103388 | SAMN05216499_103386 | Hypothetical protein. | tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.748 |
SHL32102.1 | upp | SAMN05216499_103388 | SAMN05216499_103383 | Hypothetical protein. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.649 |
SHL32142.1 | SHL31974.1 | SAMN05216499_103389 | SAMN05216499_103384 | Stress responsive A/B Barrel Domain. | Hypothetical protein. | 0.665 |
SHL32142.1 | SHL32010.1 | SAMN05216499_103389 | SAMN05216499_103385 | Stress responsive A/B Barrel Domain. | Putative tRNA adenosine deaminase-associated protein. | 0.734 |
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