STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL20789.1alpha-L-fucosidase 2. (764 aa)    
Predicted Functional Partners:
SHN02916.1
alpha-L-fucosidase.
 
  0.928
SHN38016.1
alpha-L-fucosidase.
 
  0.897
SHM46911.1
Endoglucanase.
    
  0.834
SHM95302.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
  0.722
SHM38399.1
Alpha galactosidase A.
  
     0.701
SHM08553.1
Carbohydrate binding module (family 6).
 
     0.696
SHN38026.1
Alpha-galactosidase.
 
     0.669
SHN01164.1
Alpha-galactosidase.
 
     0.661
SHM09775.1
Alpha-galactosidase.
  
  
  0.659
SHM87113.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.649
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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