STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL38857.1Sugar phosphate isomerase/epimerase. (248 aa)    
Predicted Functional Partners:
SHL38815.1
Predicted dehydrogenase.
 
 
  0.963
SHN20075.1
Predicted dehydrogenase.
 
 
  0.839
SHL38938.1
Predicted dehydrogenase.
 
 
  0.778
SHL38897.1
Sugar phosphate isomerase/epimerase.
 
     0.755
SHM59649.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
 
 0.693
SHM59621.1
5-deoxyglucuronate isomerase.
 
  
 0.600
xylB
Xylulokinase.
  
 
 0.595
SHL98577.1
WD40-like Beta Propeller Repeat.
  
     0.583
SHN20062.1
Hypothetical protein.
 
     0.581
SHM09969.1
Predicted dehydrogenase.
 
 
  0.580
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.