STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL45922.1Hypothetical protein. (318 aa)    
Predicted Functional Partners:
SHL45968.1
Amino acid/polyamine/organocation transporter, APC superfamily.
 
     0.773
SHK67829.1
Tetratricopeptide repeat-containing protein.
  
     0.763
SHL19110.1
Hypothetical protein.
  
     0.761
SHN13788.1
CHAD domain-containing protein.
  
     0.755
SHN32250.1
Hypothetical protein.
  
     0.716
SHM77527.1
NlpC/P60 family protein.
  
     0.709
SHK98011.1
Hypothetical protein.
  
     0.708
SHN00743.1
Hypothetical protein.
  
     0.698
SHN12225.1
Hypothetical protein.
  
     0.698
SHL79227.1
Hypothetical protein.
  
     0.697
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.