Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL05828.1 | SHL48387.1 | SAMN05216499_102429 | SAMN05216499_104243 | [acyl-carrier-protein] S-malonyltransferase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.867 |
SHL05828.1 | SHM11780.1 | SAMN05216499_102429 | SAMN05216499_108161 | [acyl-carrier-protein] S-malonyltransferase. | Acyl transferase domain-containing protein. | 0.999 |
SHL05828.1 | SHM11972.1 | SAMN05216499_102429 | SAMN05216499_108166 | [acyl-carrier-protein] S-malonyltransferase. | Amino acid adenylation domain-containing protein. | 0.999 |
SHL05828.1 | SHM12515.1 | SAMN05216499_102429 | SAMN05216499_108180 | [acyl-carrier-protein] S-malonyltransferase. | Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase C. | 0.999 |
SHL05828.1 | SHM83246.1 | SAMN05216499_102429 | SAMN05216499_1154 | [acyl-carrier-protein] S-malonyltransferase. | Phosphopantetheine attachment site. | 0.997 |
SHL05828.1 | SHN29467.1 | SAMN05216499_102429 | SAMN05216499_13347 | [acyl-carrier-protein] S-malonyltransferase. | Acyl transferase domain-containing protein. | 0.999 |
SHL05828.1 | SHN37286.1 | SAMN05216499_102429 | SAMN05216499_1513 | [acyl-carrier-protein] S-malonyltransferase. | Polyketide synthase 12. | 0.998 |
SHL48349.1 | SHL48387.1 | SAMN05216499_104242 | SAMN05216499_104243 | Hypothetical protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.979 |
SHL48349.1 | SHL48430.1 | SAMN05216499_104242 | SAMN05216499_104244 | Hypothetical protein. | L-threonine aldolase. | 0.965 |
SHL48349.1 | SHL48472.1 | SAMN05216499_104242 | SAMN05216499_104245 | Hypothetical protein. | Transglutaminase-like superfamily protein. | 0.810 |
SHL48387.1 | SHL05828.1 | SAMN05216499_104243 | SAMN05216499_102429 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | [acyl-carrier-protein] S-malonyltransferase. | 0.867 |
SHL48387.1 | SHL48349.1 | SAMN05216499_104243 | SAMN05216499_104242 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Hypothetical protein. | 0.979 |
SHL48387.1 | SHL48430.1 | SAMN05216499_104243 | SAMN05216499_104244 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | L-threonine aldolase. | 0.954 |
SHL48387.1 | SHL48472.1 | SAMN05216499_104243 | SAMN05216499_104245 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Transglutaminase-like superfamily protein. | 0.826 |
SHL48387.1 | SHM11780.1 | SAMN05216499_104243 | SAMN05216499_108161 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Acyl transferase domain-containing protein. | 0.790 |
SHL48387.1 | SHM11972.1 | SAMN05216499_104243 | SAMN05216499_108166 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Amino acid adenylation domain-containing protein. | 0.874 |
SHL48387.1 | SHM12515.1 | SAMN05216499_104243 | SAMN05216499_108180 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase C. | 0.809 |
SHL48387.1 | SHM83246.1 | SAMN05216499_104243 | SAMN05216499_1154 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Phosphopantetheine attachment site. | 0.804 |
SHL48387.1 | SHN29467.1 | SAMN05216499_104243 | SAMN05216499_13347 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Acyl transferase domain-containing protein. | 0.791 |
SHL48387.1 | SHN37286.1 | SAMN05216499_104243 | SAMN05216499_1513 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Polyketide synthase 12. | 0.790 |
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