Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL30521.1 | SHL49818.1 | SAMN05216499_103350 | SAMN05216499_104277 | Sulfite reductase [NADPH] flavoprotein, alpha-component; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Hypothetical protein. | 0.799 |
SHL30521.1 | SHM75857.1 | SAMN05216499_103350 | SAMN05216499_11413 | Sulfite reductase [NADPH] flavoprotein, alpha-component; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.999 |
SHL30521.1 | SHN01314.1 | SAMN05216499_103350 | SAMN05216499_11853 | Sulfite reductase [NADPH] flavoprotein, alpha-component; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.997 |
SHL30521.1 | SHN34149.1 | SAMN05216499_103350 | SAMN05216499_14046 | Sulfite reductase [NADPH] flavoprotein, alpha-component; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Ferredoxin-NADP reductase. | 0.998 |
SHL49718.1 | SHL49770.1 | SAMN05216499_104275 | SAMN05216499_104276 | Right handed beta helix region. | Hypothetical protein. | 0.788 |
SHL49718.1 | SHL49818.1 | SAMN05216499_104275 | SAMN05216499_104277 | Right handed beta helix region. | Hypothetical protein. | 0.731 |
SHL49718.1 | SHL49867.1 | SAMN05216499_104275 | SAMN05216499_104278 | Right handed beta helix region. | Hypothetical protein. | 0.810 |
SHL49718.1 | SHL49912.1 | SAMN05216499_104275 | SAMN05216499_104279 | Right handed beta helix region. | Tellurite resistance protein TerA. | 0.681 |
SHL49770.1 | SHL49718.1 | SAMN05216499_104276 | SAMN05216499_104275 | Hypothetical protein. | Right handed beta helix region. | 0.788 |
SHL49770.1 | SHL49818.1 | SAMN05216499_104276 | SAMN05216499_104277 | Hypothetical protein. | Hypothetical protein. | 0.801 |
SHL49770.1 | SHL49867.1 | SAMN05216499_104276 | SAMN05216499_104278 | Hypothetical protein. | Hypothetical protein. | 0.776 |
SHL49818.1 | SHL30521.1 | SAMN05216499_104277 | SAMN05216499_103350 | Hypothetical protein. | Sulfite reductase [NADPH] flavoprotein, alpha-component; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.799 |
SHL49818.1 | SHL49718.1 | SAMN05216499_104277 | SAMN05216499_104275 | Hypothetical protein. | Right handed beta helix region. | 0.731 |
SHL49818.1 | SHL49770.1 | SAMN05216499_104277 | SAMN05216499_104276 | Hypothetical protein. | Hypothetical protein. | 0.801 |
SHL49818.1 | SHL49867.1 | SAMN05216499_104277 | SAMN05216499_104278 | Hypothetical protein. | Hypothetical protein. | 0.853 |
SHL49818.1 | SHL49912.1 | SAMN05216499_104277 | SAMN05216499_104279 | Hypothetical protein. | Tellurite resistance protein TerA. | 0.766 |
SHL49818.1 | SHM75857.1 | SAMN05216499_104277 | SAMN05216499_11413 | Hypothetical protein. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.415 |
SHL49818.1 | SHN01314.1 | SAMN05216499_104277 | SAMN05216499_11853 | Hypothetical protein. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.847 |
SHL49818.1 | SHN34149.1 | SAMN05216499_104277 | SAMN05216499_14046 | Hypothetical protein. | Ferredoxin-NADP reductase. | 0.518 |
SHL49818.1 | pdxH | SAMN05216499_104277 | SAMN05216499_10731 | Hypothetical protein. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.609 |
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