STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL50062.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
SHL50016.1
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.837
SHL49968.1
Hopene-associated glycosyltransferase HpnB.
       0.773
SHK67829.1
Tetratricopeptide repeat-containing protein.
  
     0.725
SHL45922.1
Hypothetical protein.
  
     0.683
SHM21463.1
ADP-ribosylglycohydrolase.
  
     0.655
SHL83330.1
NYN domain-containing protein.
  
     0.643
SHL19110.1
Hypothetical protein.
  
     0.626
SHK98011.1
Hypothetical protein.
  
     0.613
SHL93222.1
PAS domain S-box-containing protein.
  
     0.608
SHL50157.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
       0.603
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.