Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL50587.1 | SHL50632.1 | SAMN05216499_104293 | SAMN05216499_104294 | Phosphotriesterase-related protein. | 4-carboxymuconolactone decarboxylase. | 0.886 |
SHL50587.1 | SHL50684.1 | SAMN05216499_104293 | SAMN05216499_104295 | Phosphotriesterase-related protein. | Protein of unknown function. | 0.886 |
SHL50587.1 | SHL50734.1 | SAMN05216499_104293 | SAMN05216499_104296 | Phosphotriesterase-related protein. | Transcriptional regulator, TetR family. | 0.665 |
SHL50587.1 | SHL50779.1 | SAMN05216499_104293 | SAMN05216499_104297 | Phosphotriesterase-related protein. | Hypothetical protein. | 0.440 |
SHL50632.1 | SHL50587.1 | SAMN05216499_104294 | SAMN05216499_104293 | 4-carboxymuconolactone decarboxylase. | Phosphotriesterase-related protein. | 0.886 |
SHL50632.1 | SHL50684.1 | SAMN05216499_104294 | SAMN05216499_104295 | 4-carboxymuconolactone decarboxylase. | Protein of unknown function. | 0.814 |
SHL50632.1 | SHL50734.1 | SAMN05216499_104294 | SAMN05216499_104296 | 4-carboxymuconolactone decarboxylase. | Transcriptional regulator, TetR family. | 0.633 |
SHL50632.1 | SHL50779.1 | SAMN05216499_104294 | SAMN05216499_104297 | 4-carboxymuconolactone decarboxylase. | Hypothetical protein. | 0.440 |
SHL50684.1 | SHL50587.1 | SAMN05216499_104295 | SAMN05216499_104293 | Protein of unknown function. | Phosphotriesterase-related protein. | 0.886 |
SHL50684.1 | SHL50632.1 | SAMN05216499_104295 | SAMN05216499_104294 | Protein of unknown function. | 4-carboxymuconolactone decarboxylase. | 0.814 |
SHL50684.1 | SHL50734.1 | SAMN05216499_104295 | SAMN05216499_104296 | Protein of unknown function. | Transcriptional regulator, TetR family. | 0.946 |
SHL50684.1 | SHL50779.1 | SAMN05216499_104295 | SAMN05216499_104297 | Protein of unknown function. | Hypothetical protein. | 0.440 |
SHL50734.1 | SHL50587.1 | SAMN05216499_104296 | SAMN05216499_104293 | Transcriptional regulator, TetR family. | Phosphotriesterase-related protein. | 0.665 |
SHL50734.1 | SHL50632.1 | SAMN05216499_104296 | SAMN05216499_104294 | Transcriptional regulator, TetR family. | 4-carboxymuconolactone decarboxylase. | 0.633 |
SHL50734.1 | SHL50684.1 | SAMN05216499_104296 | SAMN05216499_104295 | Transcriptional regulator, TetR family. | Protein of unknown function. | 0.946 |
SHL50734.1 | SHL50779.1 | SAMN05216499_104296 | SAMN05216499_104297 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.551 |
SHL50734.1 | SHL50827.1 | SAMN05216499_104296 | SAMN05216499_104298 | Transcriptional regulator, TetR family. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.403 |
SHL50734.1 | SHL50871.1 | SAMN05216499_104296 | SAMN05216499_104299 | Transcriptional regulator, TetR family. | Signal transduction histidine kinase. | 0.403 |
SHL50779.1 | SHL50587.1 | SAMN05216499_104297 | SAMN05216499_104293 | Hypothetical protein. | Phosphotriesterase-related protein. | 0.440 |
SHL50779.1 | SHL50632.1 | SAMN05216499_104297 | SAMN05216499_104294 | Hypothetical protein. | 4-carboxymuconolactone decarboxylase. | 0.440 |
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