Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL05284.1 | SHL05337.1 | SAMN05216499_102418 | SAMN05216499_102419 | High-affinity iron transporter. | Iron uptake system component EfeO. | 0.992 |
SHL05284.1 | SHL05384.1 | SAMN05216499_102418 | SAMN05216499_102420 | High-affinity iron transporter. | Deferrochelatase/peroxidase EfeB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.955 |
SHL05284.1 | SHL40824.1 | SAMN05216499_102418 | SAMN05216499_10466 | High-affinity iron transporter. | Deferrochelatase/peroxidase EfeB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.887 |
SHL05284.1 | SHL40869.1 | SAMN05216499_102418 | SAMN05216499_10467 | High-affinity iron transporter. | Iron uptake system component EfeO. | 0.926 |
SHL05284.1 | SHL67934.1 | SAMN05216499_102418 | SAMN05216499_105273 | High-affinity iron transporter. | Dye decolorizing peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.870 |
SHL05284.1 | SHL92218.1 | SAMN05216499_102418 | SAMN05216499_1077 | High-affinity iron transporter. | Iron complex transport system ATP-binding protein. | 0.495 |
SHL05284.1 | SHL98650.1 | SAMN05216499_102418 | SAMN05216499_107184 | High-affinity iron transporter. | Hypothetical protein. | 0.487 |
SHL05284.1 | SHN06294.1 | SAMN05216499_102418 | SAMN05216499_119117 | High-affinity iron transporter. | ABC transporter. | 0.495 |
SHL05284.1 | SHN27545.1 | SAMN05216499_102418 | SAMN05216499_13135 | High-affinity iron transporter. | Deferrochelatase/peroxidase EfeB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.886 |
SHL05284.1 | SHN27554.1 | SAMN05216499_102418 | SAMN05216499_13136 | High-affinity iron transporter. | High-affinity iron transporter. | 0.829 |
SHL05337.1 | SHL05284.1 | SAMN05216499_102419 | SAMN05216499_102418 | Iron uptake system component EfeO. | High-affinity iron transporter. | 0.992 |
SHL05337.1 | SHL05384.1 | SAMN05216499_102419 | SAMN05216499_102420 | Iron uptake system component EfeO. | Deferrochelatase/peroxidase EfeB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.978 |
SHL05337.1 | SHL40824.1 | SAMN05216499_102419 | SAMN05216499_10466 | Iron uptake system component EfeO. | Deferrochelatase/peroxidase EfeB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.909 |
SHL05337.1 | SHL40869.1 | SAMN05216499_102419 | SAMN05216499_10467 | Iron uptake system component EfeO. | Iron uptake system component EfeO. | 0.802 |
SHL05337.1 | SHL67934.1 | SAMN05216499_102419 | SAMN05216499_105273 | Iron uptake system component EfeO. | Dye decolorizing peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.908 |
SHL05337.1 | SHL98650.1 | SAMN05216499_102419 | SAMN05216499_107184 | Iron uptake system component EfeO. | Hypothetical protein. | 0.452 |
SHL05337.1 | SHN27545.1 | SAMN05216499_102419 | SAMN05216499_13135 | Iron uptake system component EfeO. | Deferrochelatase/peroxidase EfeB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.909 |
SHL05337.1 | SHN27554.1 | SAMN05216499_102419 | SAMN05216499_13136 | Iron uptake system component EfeO. | High-affinity iron transporter. | 0.803 |
SHL05384.1 | SHL05284.1 | SAMN05216499_102420 | SAMN05216499_102418 | Deferrochelatase/peroxidase EfeB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | High-affinity iron transporter. | 0.955 |
SHL05384.1 | SHL05337.1 | SAMN05216499_102420 | SAMN05216499_102419 | Deferrochelatase/peroxidase EfeB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | Iron uptake system component EfeO. | 0.978 |
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