STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL57686.1Pro-kumamolisin, activation domain. (674 aa)    
Predicted Functional Partners:
SHN29051.1
Peptidase A4 family protein.
  
     0.661
SHL40782.1
Phospholipase C.
  
     0.624
SHL95523.1
Hypothetical protein.
  
     0.592
SHM11119.1
Hypothetical protein.
  
     0.586
SHM62593.1
Hypothetical protein.
  
     0.579
SHN32909.1
Serine protease.
  
     0.518
SHL40869.1
Iron uptake system component EfeO.
  
     0.471
SHM80315.1
Hypothetical protein.
  
     0.468
SHN14541.1
Ricin-type beta-trefoil lectin domain-containing protein.
  
     0.462
SHN30542.1
Hypothetical protein.
  
     0.457
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.