STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL63917.1Hypothetical protein. (189 aa)    
Predicted Functional Partners:
SHL63958.1
Serine/threonine protein kinase.
 
 
   0.853
SHL64002.1
Hypothetical protein.
  
     0.695
SHL83144.1
Hypothetical protein.
  
     0.673
SHN34109.1
Barstar (barnase inhibitor).
  
     0.651
SHK98011.1
Hypothetical protein.
  
     0.596
SHL06843.1
Protein of unknown function.
  
     0.563
SHN14211.1
Tetratrico peptide repeat-containing protein.
  
     0.505
SHN32250.1
Hypothetical protein.
  
     0.490
SHL07433.1
Helix-turn-helix domain-containing protein.
  
     0.478
SHK93799.1
M6 family metalloprotease domain-containing protein.
  
     0.464
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.